Tutorial
Video tutorials walking through the BiomiX interface, analysis pipelines, and integration methods. BiomiX 3.0 tutorials are coming soon.
Written tutorials for the new single-omics and integration pipelines are already available as PDF slide decks. Video walkthroughs are currently in preparation and will follow shortly.
Step-by-step slides covering the transcriptomics, metabolomics, and methylomics pipelines in BiomiX 3.0.
Download PDFStep-by-step slides covering MOFA, SNF, NEMO, and DIABLO integration in BiomiX 3.0.
Download PDFVideo walkthroughs covering the Docker-based setup and the full BiomiX 3.0 workflow are currently in preparation.
These tutorials refer to BiomiX v2.4. The interface has changed in version 3.0, but the core analysis workflow and biological logic remain the same.
For a detailed description of all interface parameters, see the Parameters and interface reference page.
An overview of the BiomiX tool and the bioinformatics pipelines used in the analysis. Covers the general structure of the interface, input data requirements, and the main analysis workflow.
A practical example of BiomiX analysis using transcriptomic data. Covers metadata format, sample selection, advanced options, and results visualization.
How to convert data to the BiomiX format using the assisted format converter. Includes examples of metabolomics analysis with both annotated and unannotated data.
A deep dive into MOFA integration within BiomiX, including automatic factor selection, factor interpretation through pathway enrichment, PubMed bibliography search, and clinical correlation analysis.